What is the function of the alpha-CTD in the context of sigma 70?

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Study for the UCF PCB4524 Molecular Biology II Exam. Prepare with flashcards and multiple choice questions, each with hints and explanations. Gear up for success!

The alpha-CTD, or the carboxy-terminal domain of the alpha subunit of RNA polymerase, plays a crucial role in recognizing UP-elements, which are specific DNA sequences located upstream of certain promoters. These UP-elements enhance the binding affinity of RNA polymerase to the promoter by providing additional contact points between the polymerase and the DNA.

In the context of sigma 70, which is a primary sigma factor in bacteria responsible for initiating transcription, the function of the alpha-CTD in recognizing UP-elements is particularly important. This recognition assists in facilitating the recruitment of RNA polymerase to the promoter region, ultimately enhancing transcription initiation. The interaction between the alpha-CTD and these sequences is essential for the proper functioning of RNA polymerase, helping to ensure that transcription proceeds efficiently.

While the other options may involve aspects of the RNA polymerase function, they do not pertain specifically to the role of the alpha-CTD in sigma 70-mediated transcription initiation as directly as recognizing UP-elements does.